Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Gm11025-201ENSMUST00000140773 466 ntBASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Gm18195-201ENSMUST00000207604 706 ntBASIC10.74□□□□□ -0.69
Gm12887B1AVM1 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.74□□□□□ -0.69
Gm12887B1AVM1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm12887B1AVM1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Gm18057-201ENSMUST00000208220 503 ntBASIC10.73□□□□□ -0.69
Gm12887B1AVM1 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms