Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
H2afb3S4R1G7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
H2afb3S4R1G7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
H2afb3S4R1G7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12□□□□□ -0.49
H2afb3S4R1G7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12□□□□□ -0.49
H2afb3S4R1G7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12□□□□□ -0.49
H2afb3S4R1G7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12□□□□□ -0.49
H2afb3S4R1G7 Gm7390-201ENSMUST00000212452 1216 ntBASIC12□□□□□ -0.49
H2afb3S4R1G7 AC154846.1-201ENSMUST00000226278 862 ntBASIC12□□□□□ -0.49
H2afb3S4R1G7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms