Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC20.69■□□□□ 0.9
Clip1Q922J3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC20.69■□□□□ 0.9
Clip1Q922J3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Clip1Q922J3 Gm10434-201ENSMUST00000101158 471 ntBASIC20.69■□□□□ 0.9
Clip1Q922J3 Gm9176-201ENSMUST00000219955 1120 ntBASIC20.69■□□□□ 0.9
Clip1Q922J3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Clip1Q922J3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Gm44775-201ENSMUST00000207266 1456 ntBASIC20.68■□□□□ 0.9
Clip1Q922J3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Rn7s1-201ENSMUST00000174924 300 ntBASIC20.68■□□□□ 0.9
Clip1Q922J3 Rn7s2-201ENSMUST00000175032 300 ntBASIC20.68■□□□□ 0.9
Clip1Q922J3 Gm26461-201ENSMUST00000175064 290 ntBASIC20.68■□□□□ 0.9
Clip1Q922J3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clip1Q922J3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip1Q922J3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clip1Q922J3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Gm8228-201ENSMUST00000189949 2192 ntBASIC20.67■□□□□ 0.9
Clip1Q922J3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Mir7221-201ENSMUST00000184009 72 ntBASIC20.67■□□□□ 0.9
Clip1Q922J3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC20.67■□□□□ 0.9
Clip1Q922J3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Clip1Q922J3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip1Q922J3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Gm14726-201ENSMUST00000120623 896 ntBASIC20.66■□□□□ 0.9
Clip1Q922J3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Gm8176-201ENSMUST00000191297 1099 ntBASIC20.66■□□□□ 0.9
Clip1Q922J3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Gm30285-201ENSMUST00000214614 422 ntBASIC20.66■□□□□ 0.9
Clip1Q922J3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC20.66■□□□□ 0.9
Clip1Q922J3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Clip1Q922J3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip1Q922J3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clip1Q922J3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Clip1Q922J3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clip1Q922J3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clip1Q922J3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC20.65■□□□□ 0.9
Clip1Q922J3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC20.65■□□□□ 0.9
Clip1Q922J3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Clip1Q922J3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Clip1Q922J3 Gm2383-201ENSMUST00000181461 807 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms