Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trex1Q91XB0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trex1Q91XB0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trex1Q91XB0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trex1Q91XB0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Gm22323-201ENSMUST00000103832 109 ntBASIC15.2■□□□□ 0.02
Trex1Q91XB0 Gm4986-201ENSMUST00000119731 549 ntBASIC15.2■□□□□ 0.02
Trex1Q91XB0 Gm17208-201ENSMUST00000168388 535 ntBASIC15.2■□□□□ 0.02
Trex1Q91XB0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trex1Q91XB0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Gm18584-201ENSMUST00000203098 964 ntBASIC15.2■□□□□ 0.02
Trex1Q91XB0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.2■□□□□ 0.02
Trex1Q91XB0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trex1Q91XB0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.19■□□□□ 0.02
Trex1Q91XB0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.19■□□□□ 0.02
Trex1Q91XB0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Gm5781-201ENSMUST00000219792 443 ntBASIC15.19■□□□□ 0.02
Trex1Q91XB0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.19■□□□□ 0.02
Trex1Q91XB0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.19■□□□□ 0.02
Trex1Q91XB0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm24255-201ENSMUST00000104481 128 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm26083-201ENSMUST00000157904 193 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm24548-201ENSMUST00000158650 108 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm18056-201ENSMUST00000207670 568 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm18061-201ENSMUST00000208350 562 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm18063-201ENSMUST00000208529 568 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm18052-201ENSMUST00000208750 559 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm32025-201ENSMUST00000217960 307 ntBASIC15.18■□□□□ 0.02
Trex1Q91XB0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms