Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.58□□□□□ -0.39
Ndc1Q8VCB1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ndc1Q8VCB1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ndc1Q8VCB1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm10012-201ENSMUST00000078252 192 ntBASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndc1Q8VCB1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gm24196-201ENSMUST00000179161 110 ntBASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gm9899-201ENSMUST00000065519 555 ntBASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndc1Q8VCB1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms