Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC061975.2-201ENST00000581722 295 ntBASIC16.74■□□□□ 0.27
RTL3Q8N8U3 AC024267.1-201ENST00000582320 895 ntBASIC16.74■□□□□ 0.27
RTL3Q8N8U3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 MIR4321-201ENST00000592276 80 ntBASIC16.74■□□□□ 0.27
RTL3Q8N8U3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RTL3Q8N8U3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 RNA5SP410-201ENST00000516285 106 ntBASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL3Q8N8U3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 SPDYE14P-201ENST00000442619 822 ntBASIC16.72■□□□□ 0.27
RTL3Q8N8U3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 AC245100.5-201ENST00000452108 331 ntBASIC16.72■□□□□ 0.27
RTL3Q8N8U3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 AC026150.2-201ENST00000564693 1156 ntBASIC16.72■□□□□ 0.27
RTL3Q8N8U3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL3Q8N8U3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms