Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.71□□□□□ -0.06
Trim9Q8C7M3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim9Q8C7M3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim9Q8C7M3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim9Q8C7M3 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.71□□□□□ -0.06
Trim9Q8C7M3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim9Q8C7M3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Gm2495-201ENSMUST00000191160 466 ntBASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim9Q8C7M3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Gm5687-201ENSMUST00000118252 640 ntBASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim9Q8C7M3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms