Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cps1Q8C196 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cps1Q8C196 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cps1Q8C196 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.58■□□□□ 0.4
Cps1Q8C196 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cps1Q8C196 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cps1Q8C196 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cps1Q8C196 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Cps1Q8C196 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cps1Q8C196 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC17.58■□□□□ 0.4
Cps1Q8C196 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 Gm37835-201ENSMUST00000193305 361 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC17.57■□□□□ 0.4
Cps1Q8C196 AU022133-201ENSMUST00000200601 873 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 Gm44136-201ENSMUST00000203819 1106 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 Gm44126-201ENSMUST00000204831 514 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 AC166344.1-202ENSMUST00000224139 234 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 AC163667.3-201ENSMUST00000225774 222 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC17.57■□□□□ 0.4
Cps1Q8C196 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Cps1Q8C196 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cps1Q8C196 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Gm5616-201ENSMUST00000165252 384 ntBASIC17.56■□□□□ 0.4
Cps1Q8C196 Gm8741-201ENSMUST00000174736 384 ntBASIC17.56■□□□□ 0.4
Cps1Q8C196 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC17.56■□□□□ 0.4
Cps1Q8C196 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cps1Q8C196 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cps1Q8C196 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cps1Q8C196 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.55■□□□□ 0.4
Cps1Q8C196 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cps1Q8C196 Gm12266-201ENSMUST00000120311 962 ntBASIC17.54■□□□□ 0.4
Cps1Q8C196 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC17.54■□□□□ 0.4
Cps1Q8C196 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cps1Q8C196 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC17.54■□□□□ 0.4
Cps1Q8C196 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC17.54■□□□□ 0.4
Cps1Q8C196 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC17.54■□□□□ 0.4
Cps1Q8C196 Spcs1-203ENSMUST00000226374 592 ntBASIC17.54■□□□□ 0.4
Cps1Q8C196 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cps1Q8C196 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cps1Q8C196 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms