Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.51□□□□□ -0.41
Vps9d1Q8C190 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps9d1Q8C190 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps9d1Q8C190 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Gm13453-201ENSMUST00000118708 357 ntBASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Gm27306-201ENSMUST00000183970 107 ntBASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Mir6977-201ENSMUST00000184960 64 ntBASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Gm6888-201ENSMUST00000221983 706 ntBASIC12.49□□□□□ -0.41
Vps9d1Q8C190 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps9d1Q8C190 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Gm13385-201ENSMUST00000121089 220 ntBASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps9d1Q8C190 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms