Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco3Q8BQM7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gm13823-201ENSMUST00000119930 345 ntBASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gm17968-201ENSMUST00000194902 784 ntBASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco3Q8BQM7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gm7977-201ENSMUST00000193787 748 ntBASIC10.94□□□□□ -0.66
Smco3Q8BQM7 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.94□□□□□ -0.66
Smco3Q8BQM7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms