Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 AA543401-201ENSMUST00000164248 1269 ntBASIC14.18□□□□□ -0.14
CtifQ6PEE2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Gm10576-201ENSMUST00000191927 825 ntBASIC14.18□□□□□ -0.14
CtifQ6PEE2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.18□□□□□ -0.14
CtifQ6PEE2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CtifQ6PEE2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Gm37714-201ENSMUST00000194742 342 ntBASIC14.17□□□□□ -0.14
CtifQ6PEE2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CtifQ6PEE2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms