Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm24644-201ENSMUST00000157114 139 ntBASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm22331-201ENSMUST00000158066 136 ntBASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm42693-201ENSMUST00000196779 631 ntBASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm45331-201ENSMUST00000209868 554 ntBASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm10012-201ENSMUST00000078252 192 ntBASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgb4Q6P8W9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm11803-201ENSMUST00000119966 444 ntBASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm24196-201ENSMUST00000179161 110 ntBASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm27572-201ENSMUST00000183702 255 ntBASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgb4Q6P8W9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Hmgb4Q6P8W9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.95□□□□□ -0.18
Hmgb4Q6P8W9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms