Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps13aQ5H8C4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm13937-201ENSMUST00000121000 988 ntBASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm37201-201ENSMUST00000191845 523 ntBASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Snora73b-201ENSMUST00000083419 205 ntBASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm8492-201ENSMUST00000182375 987 ntBASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps13aQ5H8C4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Gm22058-201ENSMUST00000083393 310 ntBASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Gm2445-201ENSMUST00000182798 989 ntBASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Gm28324-201ENSMUST00000187913 264 ntBASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Gm32999-201ENSMUST00000192693 562 ntBASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps13aQ5H8C4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps13aQ5H8C4 Gm25072-201ENSMUST00000175233 235 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms