Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.16□□□□□ -0.14
Syne3Q4FZC9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gm43094-201ENSMUST00000196549 921 ntBASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gm15823-201ENSMUST00000064305 670 ntBASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syne3Q4FZC9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Gm11524-201ENSMUST00000119349 807 ntBASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Gm12485-201ENSMUST00000119641 291 ntBASIC14.15□□□□□ -0.14
Syne3Q4FZC9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Gm7063-201ENSMUST00000186840 981 ntBASIC14.15□□□□□ -0.14
Syne3Q4FZC9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne3Q4FZC9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms