Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.69■□□□□ 0.1
Limch1Q3UH68 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.69■□□□□ 0.1
Limch1Q3UH68 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Limch1Q3UH68 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.68■□□□□ 0.1
Limch1Q3UH68 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm6244-201ENSMUST00000178732 841 ntBASIC15.68■□□□□ 0.1
Limch1Q3UH68 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.68■□□□□ 0.1
Limch1Q3UH68 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.68■□□□□ 0.1
Limch1Q3UH68 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.68■□□□□ 0.1
Limch1Q3UH68 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.68■□□□□ 0.1
Limch1Q3UH68 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limch1Q3UH68 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.67■□□□□ 0.1
Limch1Q3UH68 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.67■□□□□ 0.1
Limch1Q3UH68 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Gm17794-201ENSMUST00000220252 955 ntBASIC15.67■□□□□ 0.1
Limch1Q3UH68 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Limch1Q3UH68 Gm24447-201ENSMUST00000083977 338 ntBASIC15.67■□□□□ 0.1
Limch1Q3UH68 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms