Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm15460-201ENSMUST00000118147 391 ntBASIC11.1□□□□□ -0.63
Tff1Q08423 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Tff1Q08423 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.1□□□□□ -0.63
Tff1Q08423 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.1□□□□□ -0.63
Tff1Q08423 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.1□□□□□ -0.63
Tff1Q08423 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.1□□□□□ -0.63
Tff1Q08423 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.1□□□□□ -0.63
Tff1Q08423 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.1□□□□□ -0.63
Tff1Q08423 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Shd-206ENSMUST00000225145 998 ntBASIC11.1□□□□□ -0.63
Tff1Q08423 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.1□□□□□ -0.63
Tff1Q08423 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Tff1Q08423 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.1□□□□□ -0.63
Tff1Q08423 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.1□□□□□ -0.63
Tff1Q08423 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Tff1Q08423 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tff1Q08423 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tff1Q08423 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Tff1Q08423 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Tff1Q08423 Gm12091-201ENSMUST00000146791 830 ntBASIC11.09□□□□□ -0.63
Tff1Q08423 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.09□□□□□ -0.63
Tff1Q08423 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tff1Q08423 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tff1Q08423 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tff1Q08423 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.09□□□□□ -0.63
Tff1Q08423 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.09□□□□□ -0.63
Tff1Q08423 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tff1Q08423 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tff1Q08423 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Tff1Q08423 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tff1Q08423 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms