Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm17877-201ENSMUST00000192578 814 ntBASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm24791-201ENSMUST00000104284 131 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm5870-201ENSMUST00000196461 282 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm7238-201ENSMUST00000206467 973 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm7719-201ENSMUST00000182374 975 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a3E9PWQ3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm12030-201ENSMUST00000121917 223 ntBASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm17827-201ENSMUST00000211825 742 ntBASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a3E9PWQ3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms