Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Gm15460-201ENSMUST00000118147 391 ntBASIC12.53□□□□□ -0.4
Trim39Q9ESN2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Gm27680-201ENSMUST00000184192 160 ntBASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim39Q9ESN2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim39Q9ESN2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim39Q9ESN2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.51□□□□□ -0.41
Trim39Q9ESN2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms