Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Gm5566-201ENSMUST00000116118 459 ntBASIC15.06■□□□□ 0
Chd1lQ9CXF7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.06■□□□□ 0
Chd1lQ9CXF7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Gm29541-201ENSMUST00000191351 678 ntBASIC15.06■□□□□ 0
Chd1lQ9CXF7 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.06■□□□□ 0
Chd1lQ9CXF7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.06■□□□□ 0
Chd1lQ9CXF7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd1lQ9CXF7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd1lQ9CXF7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Mir874-201ENSMUST00000104769 76 ntBASIC15.05■□□□□ -0
Chd1lQ9CXF7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Gm17271-201ENSMUST00000165535 355 ntBASIC15.05■□□□□ -0
Chd1lQ9CXF7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.05■□□□□ -0
Chd1lQ9CXF7 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.05■□□□□ -0
Chd1lQ9CXF7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chd1lQ9CXF7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.04■□□□□ -0
Chd1lQ9CXF7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Gm13385-201ENSMUST00000121089 220 ntBASIC15.04■□□□□ -0
Chd1lQ9CXF7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.04■□□□□ -0
Chd1lQ9CXF7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Gm45841-201ENSMUST00000207700 164 ntBASIC15.04■□□□□ -0
Chd1lQ9CXF7 Gm16476-201ENSMUST00000221544 139 ntBASIC15.04■□□□□ -0
Chd1lQ9CXF7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd1lQ9CXF7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd1lQ9CXF7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.04■□□□□ -0
Chd1lQ9CXF7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.03■□□□□ -0
Chd1lQ9CXF7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd1lQ9CXF7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Chd1lQ9CXF7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms