Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.83□□□□□ -0.2
Trim60Q8VI40 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Gm27618-201ENSMUST00000183671 60 ntBASIC13.83□□□□□ -0.2
Trim60Q8VI40 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.83□□□□□ -0.2
Trim60Q8VI40 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Gm14701-201ENSMUST00000117156 348 ntBASIC13.82□□□□□ -0.2
Trim60Q8VI40 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.82□□□□□ -0.2
Trim60Q8VI40 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.82□□□□□ -0.2
Trim60Q8VI40 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.82□□□□□ -0.2
Trim60Q8VI40 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim60Q8VI40 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.81□□□□□ -0.2
Trim60Q8VI40 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.81□□□□□ -0.2
Trim60Q8VI40 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gm17837-201ENSMUST00000186435 985 ntBASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.81□□□□□ -0.2
Trim60Q8VI40 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.81□□□□□ -0.2
Trim60Q8VI40 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.81□□□□□ -0.2
Trim60Q8VI40 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms