Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm28631-201ENSMUST00000190740 334 ntBASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim29Q8R2Q0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Gm15678-201ENSMUST00000117573 960 ntBASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Gm42550-201ENSMUST00000201553 960 ntBASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim29Q8R2Q0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms