Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm23935-201ENSMUST00000102303 57 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm24270-201ENSMUST00000102326 57 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm24245-201ENSMUST00000157318 57 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim4Q8C1Q6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim4Q8C1Q6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms