Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Gm16570-201ENSMUST00000161951 436 ntBASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gm24749-201ENSMUST00000157838 343 ntBASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gm44262-201ENSMUST00000204969 372 ntBASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 AC163667.3-201ENSMUST00000225774 222 ntBASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd4Q6PDQ2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 AC125209.1-201ENSMUST00000225812 766 ntBASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chd4Q6PDQ2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Mir5120-201ENSMUST00000175020 78 ntBASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd4Q6PDQ2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms