Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
VclQ64727 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.13□□□□□ -0.31
VclQ64727 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.13□□□□□ -0.31
VclQ64727 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.13□□□□□ -0.31
VclQ64727 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.13□□□□□ -0.31
VclQ64727 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
VclQ64727 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
VclQ64727 Gm27486-201ENSMUST00000184923 80 ntBASIC13.13□□□□□ -0.31
VclQ64727 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Gm7287-201ENSMUST00000205267 602 ntBASIC13.13□□□□□ -0.31
VclQ64727 Gm18473-201ENSMUST00000220543 868 ntBASIC13.13□□□□□ -0.31
VclQ64727 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.13□□□□□ -0.31
VclQ64727 Gm26315-201ENSMUST00000083890 321 ntBASIC13.13□□□□□ -0.31
VclQ64727 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.13□□□□□ -0.31
VclQ64727 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VclQ64727 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VclQ64727 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VclQ64727 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VclQ64727 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.13□□□□□ -0.31
VclQ64727 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.12□□□□□ -0.31
VclQ64727 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
VclQ64727 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
VclQ64727 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.12□□□□□ -0.31
VclQ64727 Gm18187-201ENSMUST00000196476 984 ntBASIC13.12□□□□□ -0.31
VclQ64727 Itm2b-204ENSMUST00000228637 783 ntBASIC13.12□□□□□ -0.31
VclQ64727 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
VclQ64727 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
VclQ64727 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VclQ64727 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
VclQ64727 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.12□□□□□ -0.31
VclQ64727 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.11□□□□□ -0.31
VclQ64727 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
VclQ64727 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
VclQ64727 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VclQ64727 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
VclQ64727 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.11□□□□□ -0.31
VclQ64727 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.11□□□□□ -0.31
VclQ64727 Gm6152-201ENSMUST00000151704 340 ntBASIC13.11□□□□□ -0.31
VclQ64727 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.11□□□□□ -0.31
VclQ64727 Gm29608-201ENSMUST00000190444 463 ntBASIC13.11□□□□□ -0.31
VclQ64727 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.11□□□□□ -0.31
VclQ64727 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.11□□□□□ -0.31
VclQ64727 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.11□□□□□ -0.31
VclQ64727 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms