Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gm15824-201ENSMUST00000119516 955 ntBASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gm29127-201ENSMUST00000188304 517 ntBASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps54Q5SPW0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Gm45242-201ENSMUST00000210666 2129 ntBASIC16■□□□□ 0.15
Vps54Q5SPW0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Gm27331-201ENSMUST00000183705 60 ntBASIC16■□□□□ 0.15
Vps54Q5SPW0 Gm29649-201ENSMUST00000185649 419 ntBASIC16■□□□□ 0.15
Vps54Q5SPW0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Gm44069-201ENSMUST00000204898 506 ntBASIC16■□□□□ 0.15
Vps54Q5SPW0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16■□□□□ 0.15
Vps54Q5SPW0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps54Q5SPW0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Gm13369-201ENSMUST00000119442 987 ntBASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Gm45841-201ENSMUST00000207700 164 ntBASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps54Q5SPW0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms