Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a2Q02788 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Gm13226-201ENSMUST00000117838 404 ntBASIC13.33□□□□□ -0.28
Col6a2Q02788 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Gm27731-201ENSMUST00000185192 107 ntBASIC13.33□□□□□ -0.28
Col6a2Q02788 Gm29127-201ENSMUST00000188304 517 ntBASIC13.33□□□□□ -0.28
Col6a2Q02788 AY702102-202ENSMUST00000194651 1173 ntBASIC13.33□□□□□ -0.28
Col6a2Q02788 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.33□□□□□ -0.28
Col6a2Q02788 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.33□□□□□ -0.28
Col6a2Q02788 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a2Q02788 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Col6a2Q02788 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm12203-201ENSMUST00000118235 598 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm12209-201ENSMUST00000120089 596 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm10156-201ENSMUST00000122364 462 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm45784-201ENSMUST00000188360 142 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm40466-201ENSMUST00000212174 422 ntBASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a2Q02788 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a2Q02788 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.31□□□□□ -0.28
Col6a2Q02788 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.31□□□□□ -0.28
Col6a2Q02788 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.31□□□□□ -0.28
Col6a2Q02788 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Gm8213-201ENSMUST00000118191 441 ntBASIC13.31□□□□□ -0.28
Col6a2Q02788 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.31□□□□□ -0.28
Col6a2Q02788 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms