Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Crnkl1P63154 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.22□□□□□ -0.29
Crnkl1P63154 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Crnkl1P63154 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.22□□□□□ -0.29
Crnkl1P63154 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.22□□□□□ -0.29
Crnkl1P63154 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Crnkl1P63154 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.22□□□□□ -0.29
Crnkl1P63154 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Crnkl1P63154 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Crnkl1P63154 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.21□□□□□ -0.29
Crnkl1P63154 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Crnkl1P63154 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Crnkl1P63154 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Crnkl1P63154 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Crnkl1P63154 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Crnkl1P63154 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.21□□□□□ -0.29
Crnkl1P63154 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Gm5312-201ENSMUST00000203728 547 ntBASIC13.21□□□□□ -0.29
Crnkl1P63154 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Crnkl1P63154 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.21□□□□□ -0.29
Crnkl1P63154 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Crnkl1P63154 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Crnkl1P63154 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Crnkl1P63154 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Crnkl1P63154 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Gm2810-201ENSMUST00000118681 990 ntBASIC13.2□□□□□ -0.3
Crnkl1P63154 Gm12882-201ENSMUST00000121696 517 ntBASIC13.2□□□□□ -0.3
Crnkl1P63154 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.2□□□□□ -0.3
Crnkl1P63154 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Crnkl1P63154 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Gm43474-201ENSMUST00000196415 774 ntBASIC13.2□□□□□ -0.3
Crnkl1P63154 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.2□□□□□ -0.3
Crnkl1P63154 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Crnkl1P63154 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Crnkl1P63154 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms