Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.1□□□□□ -0.63
Lsm5P62322 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm5P62322 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm5P62322 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.1□□□□□ -0.63
Lsm5P62322 Rubie-203ENSMUST00000227803 2430 ntBASIC11.1□□□□□ -0.63
Lsm5P62322 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm5P62322 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm5P62322 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm5P62322 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm5P62322 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm5P62322 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.1□□□□□ -0.63
Lsm5P62322 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm5P62322 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm5P62322 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm5P62322 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm5P62322 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm5P62322 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lsm5P62322 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lsm5P62322 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Lsm5P62322 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lsm5P62322 Gm29310-201ENSMUST00000185468 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21825-201ENSMUST00000185728 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm29109-201ENSMUST00000185895 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21896-201ENSMUST00000186520 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21873-201ENSMUST00000186728 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21794-201ENSMUST00000187056 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21880-201ENSMUST00000187275 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21826-201ENSMUST00000187451 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21198-201ENSMUST00000188393 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21749-201ENSMUST00000189343 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21901-201ENSMUST00000189568 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm29424-201ENSMUST00000189716 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm28599-201ENSMUST00000189838 694 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21867-201ENSMUST00000189917 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm29269-201ENSMUST00000190087 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21722-201ENSMUST00000190153 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm28423-201ENSMUST00000190701 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21899-201ENSMUST00000190745 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21910-201ENSMUST00000191163 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21849-201ENSMUST00000191571 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm28678-201ENSMUST00000191593 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm20910-201ENSMUST00000193268 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm21871-201ENSMUST00000194621 696 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm37714-201ENSMUST00000194742 342 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 AA619741-201ENSMUST00000195095 646 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Gm6443-201ENSMUST00000203599 874 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.09□□□□□ -0.63
Lsm5P62322 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lsm5P62322 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 BC001981-202ENSMUST00000191393 1545 ntBASIC11.09□□□□□ -0.63
Lsm5P62322 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm5P62322 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Lsm5P62322 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.08□□□□□ -0.64
Lsm5P62322 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm5P62322 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm5P62322 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm5P62322 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm5P62322 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm5P62322 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm5P62322 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Lsm5P62322 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.08□□□□□ -0.64
Lsm5P62322 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms