Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.21□□□□□ -0.13
NrlP54846 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
NrlP54846 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.21□□□□□ -0.13
NrlP54846 Gm16372-201ENSMUST00000073088 450 ntBASIC14.21□□□□□ -0.13
NrlP54846 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
NrlP54846 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
NrlP54846 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.21□□□□□ -0.14
NrlP54846 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.21□□□□□ -0.14
NrlP54846 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NrlP54846 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.2□□□□□ -0.14
NrlP54846 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NrlP54846 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.2□□□□□ -0.14
NrlP54846 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NrlP54846 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NrlP54846 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NrlP54846 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NrlP54846 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.2□□□□□ -0.14
NrlP54846 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NrlP54846 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NrlP54846 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NrlP54846 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
NrlP54846 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NrlP54846 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.19□□□□□ -0.14
NrlP54846 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
NrlP54846 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.19□□□□□ -0.14
NrlP54846 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NrlP54846 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.19□□□□□ -0.14
NrlP54846 Gm11618-201ENSMUST00000117946 267 ntBASIC14.19□□□□□ -0.14
NrlP54846 Gm13350-201ENSMUST00000120519 479 ntBASIC14.19□□□□□ -0.14
NrlP54846 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.19□□□□□ -0.14
NrlP54846 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.19□□□□□ -0.14
NrlP54846 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
NrlP54846 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.19□□□□□ -0.14
NrlP54846 Gm7584-201ENSMUST00000175829 940 ntBASIC14.19□□□□□ -0.14
NrlP54846 Gm27243-201ENSMUST00000183964 521 ntBASIC14.19□□□□□ -0.14
NrlP54846 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NrlP54846 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.19□□□□□ -0.14
NrlP54846 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NrlP54846 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NrlP54846 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NrlP54846 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.18□□□□□ -0.14
NrlP54846 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NrlP54846 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NrlP54846 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.18□□□□□ -0.14
NrlP54846 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms