Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gm28911-201ENSMUST00000188837 117 ntBASIC14.06□□□□□ -0.16
SftpdP50404 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.06□□□□□ -0.16
SftpdP50404 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.06□□□□□ -0.16
SftpdP50404 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.06□□□□□ -0.16
SftpdP50404 Gm9908-201ENSMUST00000211534 448 ntBASIC14.06□□□□□ -0.16
SftpdP50404 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.06□□□□□ -0.16
SftpdP50404 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SftpdP50404 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.06□□□□□ -0.16
SftpdP50404 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.06□□□□□ -0.16
SftpdP50404 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
SftpdP50404 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
SftpdP50404 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SftpdP50404 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.05□□□□□ -0.16
SftpdP50404 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.05□□□□□ -0.16
SftpdP50404 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.05□□□□□ -0.16
SftpdP50404 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.05□□□□□ -0.16
SftpdP50404 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Gm2495-201ENSMUST00000191160 466 ntBASIC14.05□□□□□ -0.16
SftpdP50404 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.05□□□□□ -0.16
SftpdP50404 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.05□□□□□ -0.16
SftpdP50404 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.05□□□□□ -0.16
SftpdP50404 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.05□□□□□ -0.16
SftpdP50404 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SftpdP50404 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SftpdP50404 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SftpdP50404 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.04□□□□□ -0.16
SftpdP50404 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.04□□□□□ -0.16
SftpdP50404 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Mir874-201ENSMUST00000104769 76 ntBASIC14.04□□□□□ -0.16
SftpdP50404 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Gm45841-201ENSMUST00000207700 164 ntBASIC14.04□□□□□ -0.16
SftpdP50404 Gm45384-201ENSMUST00000210451 277 ntBASIC14.04□□□□□ -0.16
SftpdP50404 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SftpdP50404 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.04□□□□□ -0.16
SftpdP50404 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SftpdP50404 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms