Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col2a1P28481 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col2a1P28481 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.94□□□□□ -0.02
Col2a1P28481 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.94□□□□□ -0.02
Col2a1P28481 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.94□□□□□ -0.02
Col2a1P28481 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Col2a1P28481 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.94□□□□□ -0.02
Col2a1P28481 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col2a1P28481 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Col2a1P28481 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Gm15808-201ENSMUST00000119046 604 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Col2a1P28481 Gm25668-201ENSMUST00000157700 129 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.93□□□□□ -0.02
Col2a1P28481 Gm8885-201ENSMUST00000189382 598 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 Gm5950-201ENSMUST00000213337 772 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col2a1P28481 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.93□□□□□ -0.02
Col2a1P28481 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Col2a1P28481 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Col2a1P28481 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.93□□□□□ -0.02
Col2a1P28481 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col2a1P28481 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.92□□□□□ -0.02
Col2a1P28481 Gm25043-201ENSMUST00000158604 212 ntBASIC14.92□□□□□ -0.02
Col2a1P28481 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.92□□□□□ -0.02
Col2a1P28481 Gm5904-201ENSMUST00000210286 865 ntBASIC14.92□□□□□ -0.02
Col2a1P28481 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col2a1P28481 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.92□□□□□ -0.02
Col2a1P28481 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col2a1P28481 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms