Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccl6P27784 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Ccl6P27784 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 Gm28760-201ENSMUST00000185995 736 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 Gm42612-201ENSMUST00000197986 623 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 Gm43170-201ENSMUST00000199827 612 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 Gm44719-201ENSMUST00000206404 149 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.42□□□□□ -0.74
Ccl6P27784 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccl6P27784 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.42□□□□□ -0.74
Ccl6P27784 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl6P27784 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ccl6P27784 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Ccl6P27784 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.41□□□□□ -0.74
Ccl6P27784 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Ccl6P27784 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Gm24694-201ENSMUST00000180054 110 ntBASIC10.41□□□□□ -0.74
Ccl6P27784 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ccl6P27784 Gm27663-201ENSMUST00000184839 110 ntBASIC10.41□□□□□ -0.74
Ccl6P27784 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl6P27784 Gm7730-201ENSMUST00000212486 454 ntBASIC10.41□□□□□ -0.74
Ccl6P27784 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.41□□□□□ -0.74
Ccl6P27784 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccl6P27784 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.41□□□□□ -0.74
Ccl6P27784 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl6P27784 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.41□□□□□ -0.74
Ccl6P27784 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl6P27784 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.41□□□□□ -0.74
Ccl6P27784 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl6P27784 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Ccl6P27784 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Syt7-205ENSMUST00000224135 1557 ntBASIC10.4□□□□□ -0.74
Ccl6P27784 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl6P27784 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccl6P27784 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms