Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm23931-201ENSMUST00000103842 109 ntBASIC11.14□□□□□ -0.63
Col8a2P25318 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a2P25318 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a2P25318 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.14□□□□□ -0.63
Col8a2P25318 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Gm27331-201ENSMUST00000183705 60 ntBASIC11.14□□□□□ -0.63
Col8a2P25318 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.14□□□□□ -0.63
Col8a2P25318 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Col8a2P25318 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.14□□□□□ -0.63
Col8a2P25318 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col8a2P25318 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.14□□□□□ -0.63
Col8a2P25318 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col8a2P25318 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a2P25318 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Gm13226-201ENSMUST00000117838 404 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Gm8805-201ENSMUST00000117848 313 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Gm14660-201ENSMUST00000119809 575 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Gm24644-201ENSMUST00000157114 139 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Col8a2P25318 Gm27731-201ENSMUST00000185192 107 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Gm29649-201ENSMUST00000185649 419 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Gm38144-201ENSMUST00000192790 465 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.13□□□□□ -0.63
Col8a2P25318 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.13□□□□□ -0.63
Col8a2P25318 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.13□□□□□ -0.63
Col8a2P25318 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.13□□□□□ -0.63
Col8a2P25318 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a2P25318 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms