Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.09■□□□□ 0.17
Col4a1P02463 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.09■□□□□ 0.17
Col4a1P02463 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Col4a1P02463 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.09■□□□□ 0.17
Col4a1P02463 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.08■□□□□ 0.17
Col4a1P02463 Gm13492-201ENSMUST00000119772 665 ntBASIC16.08■□□□□ 0.17
Col4a1P02463 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.08■□□□□ 0.17
Col4a1P02463 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col4a1P02463 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.08■□□□□ 0.17
Col4a1P02463 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.08■□□□□ 0.17
Col4a1P02463 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.08■□□□□ 0.17
Col4a1P02463 Gm13097-201ENSMUST00000210722 397 ntBASIC16.08■□□□□ 0.17
Col4a1P02463 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.08■□□□□ 0.17
Col4a1P02463 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.08■□□□□ 0.17
Col4a1P02463 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col4a1P02463 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Col4a1P02463 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col4a1P02463 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col4a1P02463 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.08■□□□□ 0.16
Col4a1P02463 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col4a1P02463 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col4a1P02463 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.08■□□□□ 0.16
Col4a1P02463 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col4a1P02463 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.08■□□□□ 0.16
Col4a1P02463 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Col4a1P02463 Gm15547-201ENSMUST00000122152 333 ntBASIC16.08■□□□□ 0.16
Col4a1P02463 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.08■□□□□ 0.16
Col4a1P02463 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.08■□□□□ 0.16
Col4a1P02463 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.08■□□□□ 0.16
Col4a1P02463 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.08■□□□□ 0.16
Col4a1P02463 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Col4a1P02463 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.08■□□□□ 0.16
Col4a1P02463 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col4a1P02463 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col4a1P02463 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.07■□□□□ 0.16
Col4a1P02463 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.07■□□□□ 0.16
Col4a1P02463 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Col4a1P02463 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col4a1P02463 Gm7003-201ENSMUST00000195089 312 ntBASIC16.07■□□□□ 0.16
Col4a1P02463 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col4a1P02463 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col4a1P02463 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.07■□□□□ 0.16
Col4a1P02463 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a1P02463 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.06■□□□□ 0.16
Col4a1P02463 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.06■□□□□ 0.16
Col4a1P02463 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.06■□□□□ 0.16
Col4a1P02463 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.06■□□□□ 0.16
Col4a1P02463 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.06■□□□□ 0.16
Col4a1P02463 Gm8018-201ENSMUST00000173536 789 ntBASIC16.06■□□□□ 0.16
Col4a1P02463 Gm37201-201ENSMUST00000191845 523 ntBASIC16.06■□□□□ 0.16
Col4a1P02463 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col4a1P02463 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Col4a1P02463 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.06■□□□□ 0.16
Col4a1P02463 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms