Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm38144-201ENSMUST00000192790 465 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm7653-201ENSMUST00000214567 508 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.56□□□□□ -0.4
Cx3cl1O35188 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.56□□□□□ -0.4
Cx3cl1O35188 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Gm6983-201ENSMUST00000214912 628 ntBASIC12.56□□□□□ -0.4
Cx3cl1O35188 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.56□□□□□ -0.4
Cx3cl1O35188 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.56□□□□□ -0.4
Cx3cl1O35188 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cl1O35188 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.55□□□□□ -0.4
Cx3cl1O35188 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.55□□□□□ -0.4
Cx3cl1O35188 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms