Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Gm15276-201ENSMUST00000145953 498 ntBASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Gm27046-201ENSMUST00000182160 463 ntBASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Gm26956-201ENSMUST00000182176 986 ntBASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcf11G3X9Z4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Gm27341-201ENSMUST00000183570 106 ntBASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Gm8712-201ENSMUST00000221090 701 ntBASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcf11G3X9Z4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Gm14130-201ENSMUST00000118417 987 ntBASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Gm15547-201ENSMUST00000122152 333 ntBASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Gm24990-201ENSMUST00000157406 323 ntBASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Gm4864-201ENSMUST00000219894 1461 ntBASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcf11G3X9Z4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Gm25700-201ENSMUST00000177693 110 ntBASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms