Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Colca2F8VPY8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Colca2F8VPY8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Colca2F8VPY8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Colca2F8VPY8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.52□□□□□ -0.4
Colca2F8VPY8 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.52□□□□□ -0.4
Colca2F8VPY8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Colca2F8VPY8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Colca2F8VPY8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm3508-201ENSMUST00000186012 792 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm45118-201ENSMUST00000208928 825 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm45925-201ENSMUST00000218882 744 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.52□□□□□ -0.41
Colca2F8VPY8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Colca2F8VPY8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm13296-201ENSMUST00000117854 997 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm13736-201ENSMUST00000119272 253 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm23363-201ENSMUST00000175024 79 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm27552-201ENSMUST00000183351 62 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm27844-201ENSMUST00000183613 62 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.51□□□□□ -0.41
Colca2F8VPY8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Colca2F8VPY8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.5□□□□□ -0.41
Colca2F8VPY8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Colca2F8VPY8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Colca2F8VPY8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Colca2F8VPY8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Colca2F8VPY8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Colca2F8VPY8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Colca2F8VPY8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms