Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.54□□□□□ -0.4
Gpc6Q9R087 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Gm2445-201ENSMUST00000182798 989 ntBASIC12.54□□□□□ -0.4
Gpc6Q9R087 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.54□□□□□ -0.4
Gpc6Q9R087 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.54□□□□□ -0.4
Gpc6Q9R087 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gpc6Q9R087 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.53□□□□□ -0.4
Gpc6Q9R087 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Gm4995-201ENSMUST00000117247 432 ntBASIC12.53□□□□□ -0.4
Gpc6Q9R087 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.53□□□□□ -0.4
Gpc6Q9R087 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Mir125a-201ENSMUST00000083545 68 ntBASIC12.53□□□□□ -0.4
Gpc6Q9R087 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.53□□□□□ -0.4
Gpc6Q9R087 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gpc6Q9R087 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Gpc6Q9R087 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.52□□□□□ -0.41
Gpc6Q9R087 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gpc6Q9R087 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gpc6Q9R087 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Gpc6Q9R087 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gpc6Q9R087 Gm5566-201ENSMUST00000116118 459 ntBASIC12.52□□□□□ -0.41
Gpc6Q9R087 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms