Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm12428-201ENSMUST00000119844 727 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm11745-201ENSMUST00000121669 448 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm8927-201ENSMUST00000181978 981 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm18049-201ENSMUST00000208909 581 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm3222-201ENSMUST00000071282 990 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd1lQ9CXF7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd1lQ9CXF7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.08■□□□□ 0
Chd1lQ9CXF7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.08■□□□□ 0
Chd1lQ9CXF7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd1lQ9CXF7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Gm9719-201ENSMUST00000162765 543 ntBASIC15.07■□□□□ 0
Chd1lQ9CXF7 Mir3113-201ENSMUST00000175478 76 ntBASIC15.07■□□□□ 0
Chd1lQ9CXF7 Mir8117-201ENSMUST00000184773 107 ntBASIC15.07■□□□□ 0
Chd1lQ9CXF7 Gm18766-201ENSMUST00000189811 808 ntBASIC15.07■□□□□ 0
Chd1lQ9CXF7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.07■□□□□ 0
Chd1lQ9CXF7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Gm10819-201ENSMUST00000099988 561 ntBASIC15.07■□□□□ 0
Chd1lQ9CXF7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chd1lQ9CXF7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms