Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Gm18057-201ENSMUST00000208220 503 ntBASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 AW822252-206ENSMUST00000208904 237 ntBASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Psmb5-202ENSMUST00000227257 622 ntBASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Paupar-201ENSMUST00000194826 3482 ntBASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Gm13015-201ENSMUST00000118674 204 ntBASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Gm11025-201ENSMUST00000140773 466 ntBASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ddx47Q9CWX9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Rubie-203ENSMUST00000227803 2430 ntBASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ddx47Q9CWX9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ddx47Q9CWX9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms