Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm14208-201ENSMUST00000119645 678 ntBASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm13665-201ENSMUST00000120830 528 ntBASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm2546-201ENSMUST00000182630 991 ntBASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 AA914427-201ENSMUST00000193194 1166 ntBASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm43378-201ENSMUST00000199336 582 ntBASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldnd1Q9CQX5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Gm11331-201ENSMUST00000119764 288 ntBASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Gm27023-201ENSMUST00000182372 285 ntBASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Gm32025-201ENSMUST00000217960 307 ntBASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldnd1Q9CQX5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm25214-201ENSMUST00000104573 129 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm11930-201ENSMUST00000117788 190 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm27046-201ENSMUST00000182160 463 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm28450-201ENSMUST00000187349 638 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Gm5950-201ENSMUST00000213337 772 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cldnd1Q9CQX5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms