Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 PCGF3-213ENST00000620529 1899 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 AC093525.8-201ENST00000624099 1342 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 AC105020.1-201ENST00000435356 2205 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 AC005622.1-201ENST00000636801 1703 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 ACTG1P3-201ENST00000431775 1114 ntBASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 AL158212.4-201ENST00000624062 1286 ntBASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTFDC1Q9BY42 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 MIR1908-201ENST00000410394 80 ntBASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 PDIA3P1-201ENST00000471856 1510 ntBASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.66■□□□□ 0.74
RTFDC1Q9BY42 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 LINC01144-201ENST00000626198 1710 ntBASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 AC106820.2-201ENST00000563775 3264 ntBASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 AL162726.2-201ENST00000438986 1017 ntBASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 FAM8A2P-201ENST00000528813 1142 ntBASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 MIR5189-201ENST00000577370 114 ntBASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 KRT8P22-201ENST00000562317 1415 ntBASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTFDC1Q9BY42 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms