Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gm15920-201ENSMUST00000118998 402 ntBASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gm27838-201ENSMUST00000184829 128 ntBASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Gm29667-201ENSMUST00000190817 490 ntBASIC11.21□□□□□ -0.61
H1fooQ8VIK3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H1fooQ8VIK3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.21□□□□□ -0.62
H1fooQ8VIK3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
H1fooQ8VIK3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms