Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm45841-201ENSMUST00000207700 164 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Mir7221-201ENSMUST00000184009 72 ntBASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm1Q8VC85 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Gm27306-201ENSMUST00000183970 107 ntBASIC12.84□□□□□ -0.35
Lsm1Q8VC85 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Gm24447-201ENSMUST00000083977 338 ntBASIC12.84□□□□□ -0.35
Lsm1Q8VC85 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm1Q8VC85 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.83□□□□□ -0.35
Lsm1Q8VC85 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms