Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Gm9002-201ENSMUST00000178437 499 ntBASIC13.68□□□□□ -0.22
CopaQ8CIE6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Gm18307-201ENSMUST00000206864 949 ntBASIC13.68□□□□□ -0.22
CopaQ8CIE6 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.68□□□□□ -0.22
CopaQ8CIE6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.68□□□□□ -0.22
CopaQ8CIE6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.68□□□□□ -0.22
CopaQ8CIE6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Gm5035-201ENSMUST00000215581 927 ntBASIC13.67□□□□□ -0.22
CopaQ8CIE6 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.67□□□□□ -0.22
CopaQ8CIE6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopaQ8CIE6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.66□□□□□ -0.22
CopaQ8CIE6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.66□□□□□ -0.22
CopaQ8CIE6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.66□□□□□ -0.22
CopaQ8CIE6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.66□□□□□ -0.22
CopaQ8CIE6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.66□□□□□ -0.22
CopaQ8CIE6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopaQ8CIE6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.65□□□□□ -0.22
CopaQ8CIE6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms