Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm13045-201ENSMUST00000119019 712 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm19353-201ENSMUST00000184561 445 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm3096-201ENSMUST00000185770 364 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm17208-201ENSMUST00000168388 535 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm18734-201ENSMUST00000172937 808 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Gm37905-201ENSMUST00000195310 341 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Rprl1-202ENSMUST00000198476 238 ntBASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap54Q8C6S9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Gm26361-201ENSMUST00000158868 186 ntBASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Spcs1-203ENSMUST00000226374 592 ntBASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Gm27046-201ENSMUST00000182160 463 ntBASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap54Q8C6S9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Gm7848-201ENSMUST00000210739 718 ntBASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap54Q8C6S9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cfap54Q8C6S9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms