Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Gm26185-201ENSMUST00000157692 266 ntBASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scfd1Q8BRF7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm43133-201ENSMUST00000197472 463 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm4768-201ENSMUST00000206199 686 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm19163-201ENSMUST00000223313 780 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scfd1Q8BRF7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Gm6222-202ENSMUST00000182143 629 ntBASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Gm42627-201ENSMUST00000197347 224 ntBASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Gm6458-201ENSMUST00000211573 635 ntBASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Olfr582-201ENSMUST00000098212 960 ntBASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scfd1Q8BRF7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Scfd1Q8BRF7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scfd1Q8BRF7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scfd1Q8BRF7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scfd1Q8BRF7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.21■□□□□ 0.02
Scfd1Q8BRF7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms