Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcal1Q8BJL0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.21□□□□□ -0.13
Smarcal1Q8BJL0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcal1Q8BJL0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gm6023-201ENSMUST00000118217 606 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gm16479-201ENSMUST00000121706 932 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Mospd4-201ENSMUST00000180618 576 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gm6222-202ENSMUST00000182143 629 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Gm19163-201ENSMUST00000223313 780 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcal1Q8BJL0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms