Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Proscos-202ENSMUST00000178990 666 ntBASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Gm29127-201ENSMUST00000188304 517 ntBASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Gm40466-201ENSMUST00000212174 422 ntBASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Gm9899-201ENSMUST00000065519 555 ntBASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh19Q80TF3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gm14660-201ENSMUST00000119809 575 ntBASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms