Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm16202-201ENSMUST00000117532 544 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-3Q3UHX8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Gm11425-201ENSMUST00000119608 498 ntBASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Gm37922-201ENSMUST00000195596 455 ntBASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Gm29705-201ENSMUST00000212598 474 ntBASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Gm9396-201ENSMUST00000076703 567 ntBASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx6-3Q3UHX8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx6-3Q3UHX8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms